Package index
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Basic-class - Class "Basic"
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Clonality-class - Class "Clonality"
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Diversity-class - Class "Diversity"
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Motif-class - Class "Motif"
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get_bottom_n_clonotypes() - Plot bottom n clonotypes
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get_study() - Get pyTCR data of a project
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get_top_n_clonotypes() - Plot top n clonotypes
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plot_clonal_prop_per_group() - Plot clonal proportion per group
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plot_clonal_prop_per_sample() - Plot clonal proportion per sample
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plot_clonotype_abundance() - Plot relative abundance for all clonotypes
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plot_diversity_index() - Plot diversity index metrics
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plot_motifs() - Plot Motif Counts
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plot_reads_group_abundance() - Plot reads group abundance for top 100 clonotypes
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reTCRProj-class - Class "reTCRProj"